Advancing Kidney, Kidney Tumor, Cyst Segmentation: A Multi-Planner U-Net Approach for the KiTS23 Challenge

Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

Standard

Advancing Kidney, Kidney Tumor, Cyst Segmentation : A Multi-Planner U-Net Approach for the KiTS23 Challenge. / Pandey, Sumit; Toshali, ; Perslev, Mathias; Dam, Erik B.

Kidney and Kidney Tumor Segmentation - MICCAI 2023 Challenge, KiTS 2023, Held in Conjunction with MICCAI 2023, Proceedings. ed. / Nicholas Heller; Andrew Wood; Christopher Weight; Fabian Isensee; Tim Rädsch; Resha Teipaul; Nikolaos Papanikolopoulos. Springer, 2024. p. 143-148 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 14540 LNCS).

Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

Harvard

Pandey, S, Toshali, , Perslev, M & Dam, EB 2024, Advancing Kidney, Kidney Tumor, Cyst Segmentation: A Multi-Planner U-Net Approach for the KiTS23 Challenge. in N Heller, A Wood, C Weight, F Isensee, T Rädsch, R Teipaul & N Papanikolopoulos (eds), Kidney and Kidney Tumor Segmentation - MICCAI 2023 Challenge, KiTS 2023, Held in Conjunction with MICCAI 2023, Proceedings. Springer, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 14540 LNCS, pp. 143-148, 3rd International Challenge on Kidney and Kidney Tumor Segmentation, KiTS 2023, which was held in conjunction with 26th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2023, Vancouver, Canada, 08/10/2023. https://doi.org/10.1007/978-3-031-54806-2_20

APA

Pandey, S., Toshali, Perslev, M., & Dam, E. B. (2024). Advancing Kidney, Kidney Tumor, Cyst Segmentation: A Multi-Planner U-Net Approach for the KiTS23 Challenge. In N. Heller, A. Wood, C. Weight, F. Isensee, T. Rädsch, R. Teipaul, & N. Papanikolopoulos (Eds.), Kidney and Kidney Tumor Segmentation - MICCAI 2023 Challenge, KiTS 2023, Held in Conjunction with MICCAI 2023, Proceedings (pp. 143-148). Springer. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Vol. 14540 LNCS https://doi.org/10.1007/978-3-031-54806-2_20

Vancouver

Pandey S, Toshali , Perslev M, Dam EB. Advancing Kidney, Kidney Tumor, Cyst Segmentation: A Multi-Planner U-Net Approach for the KiTS23 Challenge. In Heller N, Wood A, Weight C, Isensee F, Rädsch T, Teipaul R, Papanikolopoulos N, editors, Kidney and Kidney Tumor Segmentation - MICCAI 2023 Challenge, KiTS 2023, Held in Conjunction with MICCAI 2023, Proceedings. Springer. 2024. p. 143-148. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 14540 LNCS). https://doi.org/10.1007/978-3-031-54806-2_20

Author

Pandey, Sumit ; Toshali, ; Perslev, Mathias ; Dam, Erik B. / Advancing Kidney, Kidney Tumor, Cyst Segmentation : A Multi-Planner U-Net Approach for the KiTS23 Challenge. Kidney and Kidney Tumor Segmentation - MICCAI 2023 Challenge, KiTS 2023, Held in Conjunction with MICCAI 2023, Proceedings. editor / Nicholas Heller ; Andrew Wood ; Christopher Weight ; Fabian Isensee ; Tim Rädsch ; Resha Teipaul ; Nikolaos Papanikolopoulos. Springer, 2024. pp. 143-148 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol. 14540 LNCS).

Bibtex

@inproceedings{115be1568d9a4da6b0eacd48805f55bf,
title = "Advancing Kidney, Kidney Tumor, Cyst Segmentation: A Multi-Planner U-Net Approach for the KiTS23 Challenge",
abstract = "Accurate segmentation of kidney tumors in medical images is crucial for effective treatment planning and patient outcomes prediction. The Kidney and Kidney Tumor Segmentation challenge (KiTS23) serves as a platform for evaluating advanced segmentation methods. In this study, we present our approach utilizing a Multi-Planner U-Net for kidney tumor segmentation. Our method combines the U-Net architecture with multiple image planes to enhance spatial information and improve segmentation accuracy. We employed a 3-fold cross-validation technique on the KiTS23 dataset, evaluating Mean Dice Score, precision, and recall metrics. Results indicate promising performance in segmenting Kidney + Tumor + Cyst and Tumor-only classes, while challenges persist in segmenting Tumor + Cyst cases. Our approach demonstrates potential in kidney tumor segmentation, with room for further refinement to address complex coexisting structures.",
keywords = "kidney tumor, KiTS23 challenge, Multi-Planner U-Net, segmentation",
author = "Sumit Pandey and Toshali and Mathias Perslev and Dam, {Erik B.}",
note = "Publisher Copyright: {\textcopyright} The Author(s), under exclusive license to Springer Nature Switzerland AG 2024.; 3rd International Challenge on Kidney and Kidney Tumor Segmentation, KiTS 2023, which was held in conjunction with 26th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2023 ; Conference date: 08-10-2023 Through 08-10-2023",
year = "2024",
doi = "10.1007/978-3-031-54806-2_20",
language = "English",
isbn = "9783031548055",
series = "Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)",
publisher = "Springer",
pages = "143--148",
editor = "Nicholas Heller and Andrew Wood and Christopher Weight and Fabian Isensee and Tim R{\"a}dsch and Resha Teipaul and Nikolaos Papanikolopoulos",
booktitle = "Kidney and Kidney Tumor Segmentation - MICCAI 2023 Challenge, KiTS 2023, Held in Conjunction with MICCAI 2023, Proceedings",
address = "Switzerland",

}

RIS

TY - GEN

T1 - Advancing Kidney, Kidney Tumor, Cyst Segmentation

T2 - 3rd International Challenge on Kidney and Kidney Tumor Segmentation, KiTS 2023, which was held in conjunction with 26th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2023

AU - Pandey, Sumit

AU - Toshali, null

AU - Perslev, Mathias

AU - Dam, Erik B.

N1 - Publisher Copyright: © The Author(s), under exclusive license to Springer Nature Switzerland AG 2024.

PY - 2024

Y1 - 2024

N2 - Accurate segmentation of kidney tumors in medical images is crucial for effective treatment planning and patient outcomes prediction. The Kidney and Kidney Tumor Segmentation challenge (KiTS23) serves as a platform for evaluating advanced segmentation methods. In this study, we present our approach utilizing a Multi-Planner U-Net for kidney tumor segmentation. Our method combines the U-Net architecture with multiple image planes to enhance spatial information and improve segmentation accuracy. We employed a 3-fold cross-validation technique on the KiTS23 dataset, evaluating Mean Dice Score, precision, and recall metrics. Results indicate promising performance in segmenting Kidney + Tumor + Cyst and Tumor-only classes, while challenges persist in segmenting Tumor + Cyst cases. Our approach demonstrates potential in kidney tumor segmentation, with room for further refinement to address complex coexisting structures.

AB - Accurate segmentation of kidney tumors in medical images is crucial for effective treatment planning and patient outcomes prediction. The Kidney and Kidney Tumor Segmentation challenge (KiTS23) serves as a platform for evaluating advanced segmentation methods. In this study, we present our approach utilizing a Multi-Planner U-Net for kidney tumor segmentation. Our method combines the U-Net architecture with multiple image planes to enhance spatial information and improve segmentation accuracy. We employed a 3-fold cross-validation technique on the KiTS23 dataset, evaluating Mean Dice Score, precision, and recall metrics. Results indicate promising performance in segmenting Kidney + Tumor + Cyst and Tumor-only classes, while challenges persist in segmenting Tumor + Cyst cases. Our approach demonstrates potential in kidney tumor segmentation, with room for further refinement to address complex coexisting structures.

KW - kidney tumor

KW - KiTS23 challenge

KW - Multi-Planner U-Net

KW - segmentation

U2 - 10.1007/978-3-031-54806-2_20

DO - 10.1007/978-3-031-54806-2_20

M3 - Article in proceedings

AN - SCOPUS:85188749560

SN - 9783031548055

T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

SP - 143

EP - 148

BT - Kidney and Kidney Tumor Segmentation - MICCAI 2023 Challenge, KiTS 2023, Held in Conjunction with MICCAI 2023, Proceedings

A2 - Heller, Nicholas

A2 - Wood, Andrew

A2 - Weight, Christopher

A2 - Isensee, Fabian

A2 - Rädsch, Tim

A2 - Teipaul, Resha

A2 - Papanikolopoulos, Nikolaos

PB - Springer

Y2 - 8 October 2023 through 8 October 2023

ER -

ID: 388021142